PDBsum entry 8wpu Go to PDB code:  Pore analysis for: 8wpu calculated with MOLE 2.0 PDB id 8wpu Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   26 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.93 2.18 60.7 -1.25 -0.37 13.4 87 4 4 6 7 4 1 0  TRP 1106 B PO4 1109 B 2 2.14 2.45 62.7 -2.55 -0.72 35.2 80 3 11 2 2 1 0 1  NAG 1101 B CA 1108 B 3 1.59 3.38 65.4 -1.81 -0.61 22.4 83 5 10 8 3 2 0 1   4 1.73 1.89 72.7 -1.36 -0.47 16.4 86 6 7 9 7 5 1 0  TRP 1106 B PO4 1109 B 5 2.02 2.72 74.4 -0.68 -0.35 11.6 86 3 4 7 7 3 0 0   6 1.60 1.67 80.2 -1.32 -0.41 13.8 86 6 5 10 8 6 2 0  TRP 1107 A 7 1.75 2.13 94.0 -1.76 -0.56 23.6 85 6 12 9 6 3 1 1  NAG 1101 B TRP 1106 B CA 1108 B PO4 1109 B 8 1.58 3.33 96.4 -1.52 -0.45 21.3 84 8 11 6 3 3 0 1   9 1.59 3.33 118.3 -0.95 -0.33 14.8 83 8 7 10 7 6 2 0   10 1.63 1.87 137.3 -1.46 -0.41 22.2 82 9 14 8 7 4 2 1  CA 1101 A NAG 1102 A 11 1.75 1.94 141.8 -1.11 -0.31 18.8 82 9 12 7 7 5 2 1   12 1.82 1.92 153.4 -1.82 -0.42 27.7 81 10 18 4 6 2 2 1  CA 1101 A NAG 1102 A NAG 1 F NAG 2 F 13 1.16 1.16 26.3 2.06 0.78 3.5 74 0 1 0 11 2 1 0   14 1.87 2.10 37.4 -0.58 -0.29 14.3 96 4 2 3 6 0 0 0   15 3.08 5.54 38.3 2.06 0.92 2.6 70 2 0 1 6 9 1 0   16 2.99 3.11 39.9 -0.61 0.11 16.9 75 4 1 2 4 8 0 0  CLR 1110 B 17 1.51 1.52 49.5 -0.67 -0.19 9.1 74 2 2 2 4 4 2 1   18 1.41 1.59 102.4 -1.36 -0.41 20.9 83 11 4 4 6 1 2 0   19 1.35 2.45 103.0 -0.53 -0.10 15.2 84 9 3 5 9 2 2 0   20 1.23 2.32 142.9 -1.39 -0.37 17.4 82 11 8 11 6 5 5 3   21 1.26 2.02 174.2 -1.05 -0.25 16.9 81 11 10 11 15 7 5 2   22 1.28 1.28 46.3 -1.06 -0.49 15.9 91 4 1 2 6 0 0 0   23 1.20 1.20 61.6 -0.61 -0.38 12.9 76 2 3 1 4 2 2 0   24 1.30 1.30 43.2 -0.89 -0.35 18.1 86 4 3 2 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.