PDBsum entry 8wc7

Pore analysis for: 8wc7 calculated with

MOLE 2.0

PDB id

8wc7

Pores calculated on whole structure

Pores calculated excluding ligands

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6 pores, coloured by radius

10 pores, coloured by radius

10 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.44

2.90

27.7

-0.78

-0.06

16.5

73

3

1

2

2

1

1

3

2

1.13

1.20

72.2

0.56

-0.01

9.4

84

1

4

2

9

0

4

0

3

1.26

1.46

114.2

-1.43

-0.43

17.8

82

6

5

5

6

1

2

1

4

1.58

1.58

116.6

-1.51

-0.49

15.7

85

8

2

6

3

4

1

0

5

1.31

1.66

195.1

0.20

0.16

11.1

81

10

4

5

16

8

2

2

VMK 401 R

6

1.19

2.09

193.9

0.36

0.19

9.5

82

8

3

5

17

9

1

0

VMK 401 R

7

1.24

1.20

259.3

-0.04

0.04

8.7

82

8

5

11

23

10

4

0

VMK 401 R

8

0.85

1.30

259.1

-0.10

0.05

10.0

82

10

6

11

21

9

4

2

VMK 401 R

9

1.26

1.22

276.5

-0.54

-0.11

11.8

83

13

6

19

22

12

1

3

VMK 401 R

10

1.18

1.33

284.7

-0.15

0.00

11.3

82

16

7

19

30

11

3

5

VMK 401 R

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.