PDBsum entry 8wc4 Go to PDB code:  Tunnel analysis for: 8wc4 calculated with MOLE 2.0 PDB id 8wc4 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.73 28.7 0.88 0.39 7.9 93 2 1 2 6 1 0 0   2 1.14 1.83 30.1 0.99 0.46 7.6 94 2 1 3 6 1 0 0   3 1.14 1.35 34.0 0.56 0.31 2.9 71 0 1 3 3 7 1 0  VMT 401 R 4 1.16 1.34 37.9 0.15 0.26 7.8 70 1 2 2 4 6 2 0  VMT 401 R 5 1.21 1.40 38.7 0.80 0.22 2.8 70 0 1 1 5 8 2 0  VMT 401 R 6 1.18 1.37 38.9 0.66 0.38 5.1 70 0 2 2 4 5 2 1  VMT 401 R 7 1.15 1.34 38.9 0.04 0.16 4.4 74 0 2 4 3 6 3 0  VMT 401 R 8 1.14 1.26 52.1 0.26 0.23 4.2 74 1 1 3 8 7 2 0   9 1.22 1.41 72.5 -0.94 -0.10 8.9 77 6 2 7 5 8 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.