PDBsum entry 8vue Go to PDB code:  Tunnel analysis for: 8vue calculated with MOLE 2.0 PDB id 8vue Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.52 1.52 21.3 -0.53 -0.22 8.1 72 1 1 2 2 3 0 1   2 1.52 1.52 21.3 -0.53 -0.22 8.1 72 1 1 2 2 3 0 1   3 1.52 1.52 21.3 -0.53 -0.22 8.1 72 1 1 2 2 3 0 1   4 1.44 1.44 20.2 -2.13 -0.38 24.8 88 5 1 2 2 1 1 0   5 1.47 1.47 15.1 -2.04 -0.27 28.9 94 4 1 2 2 0 1 0   6 1.45 1.46 20.6 -2.21 -0.38 25.7 88 5 1 2 2 1 1 0   7 1.34 1.35 16.9 -2.45 -0.43 28.5 92 4 1 2 2 0 1 0   8 1.30 1.36 22.6 -2.61 -0.51 25.8 94 5 1 4 2 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.