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PDBsum entry 8vqh
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Tunnel analysis for: 8vqh calculated with  MOLE 2.0
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PDB id
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8vqh
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.16 |
2.53 |
69.7 |
-0.53 |
0.04 |
18.7 |
81 |
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8 |
7 |
4 |
13 |
3 |
1 |
0 |
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2 |
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1.17 |
2.47 |
71.1 |
-0.54 |
0.07 |
18.0 |
80 |
8 |
7 |
4 |
15 |
4 |
1 |
0 |
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3 |
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1.23 |
2.51 |
114.5 |
-0.46 |
0.04 |
18.1 |
83 |
11 |
10 |
6 |
20 |
4 |
3 |
0 |
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4 |
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1.21 |
2.71 |
115.8 |
-0.48 |
0.06 |
18.1 |
83 |
11 |
10 |
6 |
21 |
5 |
3 |
0 |
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5 |
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1.34 |
1.55 |
16.9 |
-1.33 |
-0.72 |
17.3 |
80 |
1 |
3 |
2 |
1 |
0 |
2 |
1 |
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6 |
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1.42 |
1.55 |
17.1 |
-1.21 |
-0.71 |
16.4 |
87 |
1 |
3 |
2 |
1 |
0 |
1 |
0 |
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7 |
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1.42 |
1.55 |
17.1 |
-1.21 |
-0.71 |
16.4 |
87 |
1 |
3 |
2 |
1 |
0 |
1 |
0 |
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8 |
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1.20 |
1.22 |
17.3 |
0.99 |
0.28 |
1.6 |
75 |
0 |
0 |
1 |
8 |
1 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program