PDBsum entry 8vqe Go to PDB code:  Tunnel analysis for: 8vqe calculated with MOLE 2.0 PDB id 8vqe Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.34 19.1 -0.38 -0.33 2.3 83 0 0 4 4 2 1 0   2 1.35 1.35 23.2 -1.12 -0.55 2.7 89 0 0 7 3 1 0 0  NAG 1 D NAG 2 D 3 1.47 1.55 25.2 -0.51 -0.35 4.4 79 0 1 5 2 3 1 0   4 1.48 1.55 25.8 -1.72 -0.74 14.3 84 1 3 4 2 1 0 0   5 1.47 1.55 27.5 -2.00 -0.65 22.9 81 3 3 3 2 1 0 0   6 1.47 1.55 28.5 -1.48 -0.63 16.0 80 1 4 3 4 1 0 0   7 1.46 1.54 34.6 -1.61 -0.44 17.8 80 4 2 4 2 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.