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PDBsum entry 8vcs
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Pore analysis for: 8vcs calculated with  MOLE 2.0
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PDB id
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8vcs
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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4 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.07 |
2.07 |
71.5 |
-2.41 |
-0.38 |
32.8 |
78 |
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12 |
7 |
2 |
4 |
3 |
0 |
0 |
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GAL 401 F
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2 |
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2.04 |
2.05 |
96.8 |
-2.27 |
-0.39 |
29.0 |
80 |
19 |
7 |
3 |
4 |
3 |
0 |
0 |
GAL 401 F GLC 1 O GAL 2 O
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3 |
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1.97 |
1.94 |
138.7 |
-1.99 |
-0.47 |
22.6 |
86 |
15 |
5 |
10 |
6 |
2 |
0 |
0 |
GAL 302 C GAL 401 F
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4 |
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2.18 |
3.53 |
144.4 |
-1.82 |
-0.40 |
23.6 |
84 |
16 |
9 |
8 |
8 |
3 |
0 |
0 |
GAL 302 C
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5 |
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2.16 |
2.41 |
150.7 |
-1.89 |
-0.45 |
22.2 |
84 |
20 |
7 |
10 |
7 |
3 |
0 |
0 |
GAL 302 C GLC 1 O GAL 2 O
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program