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PDBsum entry 8v9h

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 8v9h calculated with MOLE 2.0 PDB id
8v9h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.28 19.1 -1.00 -0.75 3.9 96 0 1 3 1 0 0 0  EDO 302 A
2 1.32 2.49 22.4 -1.32 -0.59 12.9 89 2 2 2 1 2 0 0  EDO 302 A
3 1.40 1.60 20.3 -1.23 -0.66 11.2 88 2 2 2 1 1 0 1  EDO 303 B
4 1.39 1.60 20.5 -1.39 -0.70 12.4 88 2 2 2 1 1 0 1  EDO 303 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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