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PDBsum entry 8v8s

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 8v8s calculated with MOLE 2.0 PDB id
8v8s
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.42 26.7 0.55 -0.20 5.0 81 1 1 2 8 0 0 1  
2 1.25 1.37 28.3 0.44 -0.21 4.0 95 1 1 2 6 0 0 1  
3 1.25 1.37 28.3 0.44 -0.21 4.0 95 1 1 2 6 0 0 1  
4 1.36 1.42 30.9 0.26 -0.41 4.0 81 1 1 2 8 0 0 1  
5 1.36 1.43 31.1 0.28 -0.40 4.0 81 1 1 2 8 0 0 1  
6 1.39 4.11 38.1 0.42 -0.35 2.6 63 0 0 0 4 4 0 0  
7 1.33 3.56 42.7 1.17 0.37 12.0 66 0 4 0 12 4 4 0  
8 1.17 1.23 62.2 0.63 0.33 9.8 83 6 1 3 15 3 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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