PDBsum entry 8v8p Go to PDB code:  Tunnel analysis for: 8v8p calculated with MOLE 2.0 PDB id 8v8p Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 2.16 37.7 -0.93 -0.12 19.5 82 5 4 3 5 2 0 0  DFV 301 D 2 1.28 2.19 38.1 -0.43 0.22 14.0 83 4 1 3 7 4 0 0  DFV 301 B DFV 301 D 3 1.26 2.14 39.0 -0.41 0.18 14.5 85 3 1 4 8 4 1 0  DFV 301 B DFV 301 D 4 1.29 2.19 39.6 -0.08 0.13 13.8 82 5 2 2 6 4 0 1   5 1.20 2.84 18.3 1.70 0.78 3.8 81 1 0 2 4 4 0 0   6 1.22 3.26 22.1 0.48 0.60 11.0 77 2 0 2 5 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.