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PDBsum entry 8v8p

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protein ligands Protein-protein interface(s) links
Isomerase PDB id
8v8p

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
(+ 2 more) 211 a.a.
Ligands
DFV ×5
PDB id:
8v8p
Name: Isomerase
Title: Sorghum chalcone isomerase
Structure: Chalcone-flavonone isomerase family protein. Chain: a, b, c, d, e, f, g, h. Engineered: yes
Source: Sorghum bicolor. Sorghum. Organism_taxid: 4558. Gene: sorbi_3001g035600. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
3.18Å     R-factor:   0.220     R-free:   0.274
Authors: J.A.Lewis,C.Kang
Key ref: J.A.Lewis et al. (2024). Structural and interactional analysis of the flavonoi pathway proteins: chalcone synthase, Chalcone isomera chalcone isomerase-Like protein. Int j mol sci, 25, . PubMed id: 38891840
Date:
05-Dec-23     Release date:   29-May-24    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
C5WV22  (C5WV22_SORBI) -  Chalcone-flavonone isomerase family protein from Sorghum bicolor
Seq:
Struc:
231 a.a.
211 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.5.5.1.6  - chalcone isomerase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Flavonoid Biosynthesis
      Reaction: a chalcone = a flavanone
chalcone
=
flavanone
Bound ligand (Het Group name = DFV)
matches with 89.47% similarity
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 

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