PDBsum entry 8v8c Go to PDB code:  Pore analysis for: 8v8c calculated with MOLE 2.0 PDB id 8v8c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   21 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.51 3.27 27.6 -2.80 -0.83 30.7 84 1 7 3 1 0 1 1   2 1.64 3.46 28.0 -2.30 -0.45 20.1 83 3 1 4 0 1 0 0  NAG 1 J NAG 2 J 3 1.29 2.68 28.2 -1.81 -0.31 14.4 74 3 1 3 1 3 1 0   4 2.00 3.18 38.0 -2.57 -0.81 27.1 80 1 6 5 0 0 2 2   5 1.26 2.69 38.0 -0.99 -0.29 11.7 77 3 3 5 2 3 1 1  EPJ 604 D NAG 1 J NAG 2 J 6 1.28 3.12 38.2 -0.64 -0.04 11.3 77 3 4 4 3 3 0 1  EPJ 603 A NAG 1 G NAG 2 G 7 2.31 2.51 39.9 -2.52 -0.75 27.6 75 4 7 5 1 1 2 2   8 1.95 2.65 46.5 -2.45 -0.66 25.9 76 4 7 5 1 1 2 2   9 2.05 2.22 58.1 -2.42 -0.52 27.3 81 8 8 5 9 2 1 0  I34 605 B 10 1.98 3.17 58.4 -2.28 -0.55 28.0 81 7 9 5 10 1 1 0  I34 601 E 11 1.89 2.48 58.5 -1.98 -0.52 27.6 80 6 9 5 10 2 1 0  I34 605 E 12 1.97 3.00 62.8 -1.66 -0.30 24.2 79 7 8 5 12 3 1 0  I34 605 C 13 2.02 2.54 73.6 -0.93 -0.13 15.1 80 3 6 5 19 3 2 0  I34 605 B I34 601 E 14 1.97 3.16 74.5 0.49 0.29 8.6 77 2 2 3 22 4 2 0  I34 605 C I34 601 E 15 1.98 3.00 75.6 -0.38 0.08 12.9 78 2 5 5 21 5 2 0  I34 605 B I34 605 C 16 1.88 2.77 75.9 -0.95 -0.19 17.3 79 3 7 5 19 4 2 0  I34 605 B I34 605 E 17 1.34 1.41 76.5 -1.71 -0.42 15.4 83 4 7 9 12 4 1 0  CA 601 B I34 605 B 18 1.89 2.22 77.8 -0.49 -0.13 16.8 77 2 4 3 20 3 2 0  I34 601 E I34 605 E 19 1.87 2.88 79.0 -0.11 0.04 14.7 76 2 4 3 22 5 2 0  I34 605 C I34 605 E 20 1.34 1.34 78.8 -1.63 -0.46 17.9 82 4 6 8 13 3 1 0  CA 601 B I34 601 E 21 1.36 1.46 79.0 -1.59 -0.50 19.5 81 3 6 8 13 4 1 0  CA 601 B I34 605 E 22 1.35 1.45 81.2 -1.07 -0.22 13.5 81 4 5 9 15 5 1 0  CA 601 B I34 605 C 23 1.87 2.77 83.1 0.34 -0.20 10.3 84 0 10 7 20 2 1 0  I34 605 E 24 2.71 2.71 84.9 -1.04 -0.50 21.6 85 7 18 10 11 0 0 0   25 1.84 3.61 95.5 -0.18 0.28 14.7 74 3 5 3 10 5 2 3   26 1.96 2.81 100.1 -0.26 -0.32 15.4 84 2 13 8 20 1 1 0  I34 601 E 27 1.34 1.36 103.9 -0.80 -0.47 16.5 86 3 15 13 14 2 0 0  CA 601 B 28 1.84 3.61 108.1 -0.98 -0.02 20.2 76 3 8 6 9 5 3 3   29 2.05 2.22 110.5 -0.67 -0.39 16.0 83 2 15 13 20 3 1 0  I34 605 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.