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PDBsum entry 8v3c
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Pore analysis for: 8v3c calculated with  MOLE 2.0
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PDB id
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8v3c
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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27 pores,
coloured by radius |
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27 pores,
coloured by radius
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27 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.78 |
3.89 |
39.7 |
0.53 |
-0.16 |
4.6 |
87 |
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1 |
0 |
3 |
11 |
2 |
0 |
0 |
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2 |
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2.77 |
3.63 |
40.9 |
0.67 |
-0.14 |
3.6 |
85 |
1 |
0 |
3 |
13 |
3 |
0 |
0 |
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3 |
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3.10 |
4.36 |
45.4 |
-1.97 |
-0.66 |
26.4 |
96 |
3 |
7 |
8 |
3 |
0 |
0 |
0 |
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4 |
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3.06 |
3.35 |
46.3 |
-1.74 |
-0.59 |
25.7 |
90 |
3 |
11 |
6 |
3 |
0 |
1 |
0 |
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5 |
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2.66 |
4.55 |
50.4 |
0.77 |
0.00 |
5.0 |
89 |
1 |
0 |
4 |
14 |
3 |
0 |
0 |
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6 |
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2.75 |
2.92 |
52.5 |
-2.08 |
-0.65 |
25.5 |
90 |
6 |
5 |
7 |
2 |
1 |
0 |
0 |
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7 |
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2.74 |
2.92 |
52.5 |
-2.70 |
-0.73 |
31.1 |
87 |
6 |
8 |
6 |
0 |
1 |
1 |
0 |
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8 |
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3.06 |
3.35 |
53.8 |
-0.87 |
-0.20 |
17.9 |
84 |
5 |
7 |
5 |
7 |
1 |
1 |
0 |
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9 |
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2.96 |
4.52 |
53.9 |
-0.18 |
-0.21 |
13.1 |
88 |
2 |
4 |
6 |
7 |
2 |
0 |
0 |
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10 |
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2.74 |
2.93 |
53.7 |
-1.41 |
-0.45 |
19.9 |
91 |
4 |
3 |
7 |
5 |
1 |
1 |
0 |
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11 |
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3.08 |
4.36 |
54.6 |
-1.41 |
-0.53 |
22.8 |
91 |
3 |
6 |
7 |
5 |
1 |
1 |
0 |
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12 |
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2.75 |
2.92 |
54.7 |
-0.54 |
-0.32 |
14.4 |
86 |
4 |
4 |
5 |
6 |
2 |
1 |
0 |
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13 |
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2.96 |
4.53 |
54.8 |
-0.69 |
-0.39 |
18.4 |
86 |
2 |
6 |
5 |
6 |
2 |
1 |
0 |
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14 |
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3.07 |
3.34 |
56.1 |
-2.01 |
-0.57 |
27.0 |
89 |
5 |
11 |
7 |
4 |
0 |
1 |
0 |
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15 |
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2.74 |
3.84 |
56.0 |
-1.18 |
-0.60 |
20.0 |
89 |
2 |
6 |
6 |
6 |
1 |
1 |
0 |
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16 |
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2.73 |
3.85 |
57.1 |
-1.21 |
-0.58 |
17.4 |
88 |
4 |
4 |
6 |
6 |
1 |
1 |
0 |
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17 |
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3.14 |
4.46 |
61.3 |
-1.47 |
-0.53 |
22.4 |
91 |
4 |
5 |
8 |
6 |
1 |
1 |
0 |
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18 |
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2.73 |
3.85 |
62.7 |
-1.17 |
-0.53 |
19.4 |
89 |
3 |
5 |
7 |
7 |
1 |
1 |
0 |
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19 |
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2.75 |
2.91 |
64.8 |
-2.12 |
-0.54 |
27.1 |
84 |
10 |
11 |
6 |
3 |
1 |
1 |
0 |
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20 |
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2.99 |
4.65 |
67.3 |
-0.78 |
-0.34 |
18.6 |
83 |
6 |
9 |
5 |
9 |
2 |
1 |
0 |
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21 |
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2.75 |
3.84 |
68.5 |
-1.10 |
-0.45 |
19.7 |
85 |
6 |
9 |
6 |
9 |
1 |
1 |
0 |
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22 |
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2.27 |
4.68 |
138.2 |
1.08 |
0.28 |
4.7 |
79 |
3 |
1 |
6 |
20 |
10 |
1 |
0 |
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23 |
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1.15 |
1.33 |
170.9 |
-0.85 |
-0.23 |
17.0 |
84 |
8 |
9 |
12 |
11 |
8 |
1 |
0 |
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24 |
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1.27 |
1.55 |
189.5 |
0.38 |
0.34 |
11.5 |
76 |
7 |
4 |
6 |
15 |
13 |
1 |
0 |
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25 |
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2.34 |
2.55 |
33.8 |
-1.31 |
-0.10 |
13.1 |
82 |
2 |
2 |
3 |
3 |
4 |
0 |
0 |
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26 |
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1.70 |
1.70 |
34.3 |
-1.31 |
-0.15 |
18.4 |
82 |
3 |
2 |
3 |
3 |
2 |
1 |
0 |
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27 |
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1.71 |
1.70 |
37.9 |
-0.59 |
-0.11 |
10.0 |
82 |
2 |
1 |
4 |
6 |
4 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program