PDBsum entry 8uo4 Go to PDB code:  Pore analysis for: 8uo4 calculated with MOLE 2.0 PDB id 8uo4 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.13 2.75 46.1 -0.67 -0.08 11.9 86 2 2 3 6 3 0 0   2 1.20 1.21 49.0 0.99 0.28 7.9 85 3 2 3 9 3 0 0  GTP 401 A 3 2.30 2.29 49.9 -1.40 -0.45 11.3 87 4 1 3 3 2 0 0   4 1.95 1.95 56.4 -1.34 -0.47 15.5 86 5 2 6 2 1 1 2   5 1.35 2.06 62.1 -1.01 -0.31 16.2 84 3 5 3 6 2 1 1  GTP 401 A 6 2.47 2.47 62.7 -1.98 -0.52 18.9 86 6 1 5 1 3 0 0   7 1.16 2.49 67.7 0.31 0.15 5.9 79 3 2 4 8 2 4 0   8 1.35 2.09 69.9 -1.02 -0.36 14.9 87 3 4 2 5 2 0 0  GTP 401 A 9 1.29 2.80 113.1 -0.60 0.07 15.5 78 8 5 6 11 5 1 1   10 1.27 3.74 134.1 -1.05 -0.12 19.8 83 11 5 5 11 4 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.