PDBsum entry 8u72 Go to PDB code:  Pore analysis for: 8u72 calculated with MOLE 2.0 PDB id 8u72 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.08 1.33 37.5 0.55 0.28 16.0 72 4 2 1 8 0 1 1   2 1.49 3.04 51.3 -0.68 -0.07 11.8 70 6 1 1 3 6 2 0  DC 7 N DA 8 N DA 9 N DC 10 N 3 1.20 2.46 52.1 -0.89 0.04 14.2 65 5 0 0 4 5 2 0  G 11 U G 12 U U 13 U DT 5 V DA 6 V DC 7 V DA 8 V DA 9 V DC 10 V 4 3.60 3.60 57.0 -2.80 -0.71 24.8 84 6 4 7 1 0 0 0   5 1.18 1.71 61.3 -1.01 0.01 15.6 64 5 2 0 2 6 1 0  U 13 U U 14 U G 15 U DA 9 V DC 10 V DC 11 V 6 2.08 2.08 73.3 -1.49 -0.54 18.1 74 5 2 0 2 2 1 0  G 11 U G 12 U U 13 U U 14 U G 15 U DT 3 V DT 5 V DA 6 V DC 7 V DA 8 V DA 9 V DC 10 V DC 11 V 7 2.97 2.99 73.9 -2.12 -0.73 18.8 81 7 8 9 2 1 0 0   8 1.29 1.99 79.7 -2.19 -0.59 26.5 84 9 6 7 4 0 0 0   9 1.56 1.57 87.2 -1.49 -0.49 14.9 75 5 3 2 1 3 1 0  A 10 U G 11 U G 12 U U 13 U U 14 U G 15 U DC 11 V DA 13 V DC 14 V 10 1.88 1.89 98.6 -2.10 -0.51 22.6 81 11 6 4 1 2 0 0  G 11 S G 12 S U 13 S U 14 S DC 10 T DC 11 T DA 13 T DC 14 T 11 1.74 3.19 107.5 -1.61 -0.62 16.1 82 12 3 4 1 1 2 0  U 1 M G 4 M G 5 M U 6 M U 9 M G 11 M DC 7 N DA 8 N DA 9 N DC 10 N DC 11 N DT 12 N DA 13 N DC 14 N DT 15 N DA 16 N DC 17 N 12 2.45 2.83 112.8 -1.60 -0.53 15.3 82 5 2 4 2 3 2 0  U 1 U G 4 U G 5 U U 6 U A 7 U G 8 U U 9 U G 11 U G 12 U U 13 U DT 5 V DA 6 V DC 7 V DA 8 V DA 9 V DC 10 V DA 13 V DC 14 V DT 15 V DA 16 V 13 1.49 3.21 114.4 -1.68 -0.39 18.3 75 13 2 3 3 5 3 0  U 1 M G 4 M G 5 M U 6 M U 9 M G 11 M DA 9 N DC 10 N DC 11 N DT 12 N DA 13 N DC 14 N DT 15 N DA 16 N DC 17 N 14 1.87 1.92 118.1 -1.99 -0.46 26.8 78 9 11 2 6 4 2 0   15 1.26 2.57 132.0 -1.13 -0.29 12.0 76 9 2 5 6 8 3 0  U 1 U G 4 U G 5 U U 6 U A 7 U G 8 U U 9 U DA 9 V DC 10 V DA 13 V DC 14 V DT 15 V DA 16 V 16 1.81 3.65 130.8 -2.35 -0.41 31.8 79 11 11 5 4 3 1 0  G 11 M DA 13 N DC 14 N DT 15 N DA 16 N DC 17 N 17 2.37 2.45 168.2 -1.05 -0.38 15.9 85 11 6 6 6 3 2 0  U 1 M G 4 M G 5 M U 6 M U 9 M DC 7 N DA 8 N DA 9 N DC 10 N DC 11 N DT 12 N DA 13 N DC 14 N DT 15 N DA 16 N DC 17 N DC 18 N DT 19 N DC 20 N 18 1.93 1.94 196.6 -2.22 -0.50 27.3 81 12 8 6 3 3 2 0  U 1 U G 4 U G 5 U U 6 U A 7 U G 8 U U 9 U G 11 U G 12 U U 13 U DT 5 V DA 6 V DC 7 V DA 8 V DA 9 V DC 10 V DA 13 V DC 14 V DT 15 V DA 16 V DC 17 V 19 1.97 2.01 203.4 -1.95 -0.49 22.6 80 13 11 6 3 5 3 0  DC 14 V DT 15 V DA 16 V DC 17 V 20 1.65 1.69 239.8 -1.94 -0.53 21.5 81 16 11 11 6 5 2 0  DC 14 V DT 15 V DA 16 V DC 17 V 21 2.11 2.11 251.5 -2.16 -0.49 26.1 81 18 13 6 5 5 3 0  U 1 U G 4 U G 5 U U 6 U A 7 U G 8 U U 9 U U 13 U U 14 U G 15 U DT 3 V DA 9 V DC 10 V DC 11 V DA 13 V DC 14 V DT 15 V DA 16 V DC 17 V 22 1.32 2.85 259.3 -2.14 -0.39 24.7 78 21 11 11 9 8 3 0  U 1 U G 4 U G 5 U U 6 U A 7 U G 8 U U 9 U DA 9 V DC 10 V DA 13 V DC 14 V DT 15 V DA 16 V DC 17 V Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.