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PDBsum entry 8u02

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8u02 calculated with MOLE 2.0 PDB id
8u02
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.42 2.42 33.3 -2.32 -0.62 28.8 90 5 5 4 3 0 0 0  
2 1.04 3.88 75.1 -0.97 -0.02 14.8 77 4 3 2 4 3 2 0  
3 1.25 1.27 84.2 -1.25 -0.11 14.1 81 7 2 8 6 4 2 0  
4 2.32 2.45 89.7 -1.90 -0.46 20.7 82 8 5 8 6 3 1 0  
5 2.37 2.51 96.7 -1.77 -0.24 26.2 81 8 5 6 7 2 1 0  
6 1.26 1.27 104.0 -1.28 -0.11 16.2 79 7 3 5 8 4 3 0  
7 1.92 1.95 138.7 -1.50 -0.51 20.9 84 9 6 6 5 3 1 1  
8 1.17 1.22 27.1 1.30 0.29 5.7 84 0 4 2 5 1 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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