PDBsum entry 8tzq

Pore analysis for: 8tzq calculated with

MOLE 2.0

PDB id

8tzq

Pores calculated on whole structure

Pores calculated excluding ligands

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6 pores, coloured by radius

8 pores, coloured by radius

8 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.65

2.09

29.5

-1.67

-0.55

20.1

85

3

4

2

3

1

0

0

2

1.64

2.21

40.0

-1.86

-0.42

19.8

79

6

2

4

1

3

0

0

3

1.25

1.31

176.3

-1.35

-0.45

16.6

80

10

9

6

5

5

3

0

4

1.22

2.40

191.1

-0.87

-0.47

12.6

87

4

7

4

8

1

0

0

5

1.42

2.31

29.4

1.34

0.78

6.9

65

1

1

1

6

4

1

2

6

1.33

1.37

34.1

0.21

0.21

6.2

66

0

2

1

3

4

2

1

LDP 501 R

7

1.32

1.35

43.3

1.09

0.53

7.0

65

2

1

0

9

6

1

3

LDP 501 R

8

1.16

1.52

28.5

0.20

0.02

7.0

82

2

0

2

7

0

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.