PDBsum entry 8tjs Go to PDB code:  Tunnel analysis for: 8tjs calculated with MOLE 2.0 PDB id 8tjs Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 2.86 19.7 0.86 0.43 6.2 84 0 2 4 5 1 1 0  NAG 609 O 2 1.26 2.86 26.5 0.58 0.20 5.0 86 1 1 3 5 1 1 0   3 1.31 3.16 26.8 -0.64 0.10 7.9 84 0 2 4 4 1 1 0   4 1.28 2.87 30.2 0.51 0.18 7.3 85 1 2 2 5 1 1 0   5 1.09 3.47 31.2 -1.12 -0.11 10.6 85 1 3 4 5 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.