PDBsum entry 8thl Go to PDB code:  Tunnel analysis for: 8thl calculated with MOLE 2.0 PDB id 8thl Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 3.22 16.0 1.66 0.69 9.9 66 0 2 1 3 3 0 0   2 1.04 2.42 33.2 2.41 0.91 5.0 75 1 1 1 10 5 0 0   3 1.32 2.13 18.7 2.52 0.65 1.1 80 0 0 2 8 0 0 0   4 1.32 2.13 18.9 1.98 0.50 1.3 79 0 0 2 6 0 1 0   5 1.30 2.47 19.3 2.34 0.57 1.2 82 0 0 2 9 0 0 0   6 1.32 2.13 19.5 1.95 0.46 1.4 81 0 0 2 7 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.