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PDBsum entry 8thk

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8thk calculated with MOLE 2.0 PDB id
8thk
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.91 2.07 26.3 -1.12 -0.13 22.1 82 7 1 2 3 2 0 0  
2 1.32 1.38 29.1 -1.50 -0.32 14.1 85 2 1 4 1 3 0 0  
3 1.20 1.25 57.1 -1.47 -0.46 16.7 81 6 4 7 4 3 1 2  
4 2.06 2.43 40.1 -1.43 -0.49 18.5 88 5 2 2 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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