PDBsum entry 8tf5 Go to PDB code:  Tunnel analysis for: 8tf5 calculated with MOLE 2.0 PDB id 8tf5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 1.37 23.0 1.59 0.82 1.1 87 0 0 2 8 2 0 0  P15 1203 A 2 1.20 1.39 25.9 0.51 0.70 5.4 72 1 0 0 7 3 0 0  YCM 249 A P15 1203 A 3 1.20 1.39 36.5 -0.74 0.28 14.6 80 3 0 2 10 1 1 0  P15 1203 A 4 1.19 2.10 46.3 -0.38 0.33 11.0 78 4 0 2 9 2 5 0  P15 1203 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.