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PDBsum entry 8t4z

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 8t4z calculated with MOLE 2.0 PDB id
8t4z
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.14 2.56 22.4 1.16 0.86 4.3 66 1 1 0 5 2 2 0  Y73 401 A
2 1.15 2.56 27.0 0.96 0.64 4.7 65 1 0 0 5 2 2 0  Y73 401 A
3 1.22 1.43 43.2 0.77 0.55 7.0 78 2 3 2 11 4 2 0  Y73 401 A
4 1.38 1.48 20.0 0.65 -0.01 10.0 80 2 1 0 5 1 1 0  
5 1.42 1.63 24.9 0.00 -0.28 2.4 77 0 0 3 3 2 0 0  
6 1.34 1.50 35.4 0.08 -0.25 7.7 83 2 1 1 6 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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