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PDBsum entry 8szg

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Pore analysis for: 8szg calculated with MOLE 2.0 PDB id
8szg
Pores calculated on whole structure Pores calculated excluding ligands

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22 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.92 4.87 31.5 -2.85 -0.43 28.4 74 7 1 2 0 2 1 0  PCW 1204 A CLR 1401 B
2 1.46 1.67 49.3 1.66 0.74 1.4 76 0 1 3 11 7 0 0  YP4 1407 B
3 1.29 1.29 53.6 -2.07 -0.56 21.3 75 4 2 2 1 1 1 0  PCW 1204 A CLR 1401 B
4 2.90 2.81 73.6 1.30 0.78 6.4 72 4 0 2 10 10 1 1  YP4 1201 A PCW 1204 A CLR 1401 B
5 1.47 1.64 103.5 1.61 0.78 2.7 75 2 0 3 14 11 0 2  YP4 1407 B
6 1.22 1.34 141.7 -1.63 -0.37 21.0 83 13 5 5 11 2 3 0  
7 1.18 1.38 219.0 -1.29 -0.32 16.4 79 9 7 10 11 7 3 1  
8 1.16 1.38 234.1 -1.28 -0.19 19.7 78 14 4 7 11 6 3 1  PCW 1204 A CLR 1401 B
9 1.21 2.36 281.9 -0.27 0.09 12.6 76 17 9 11 28 16 5 6  YP4 1201 A PCW 1204 A CLR 1401 B
10 1.79 1.85 69.1 -1.83 -0.47 20.9 85 7 7 10 4 5 2 0  TRP 1208 A
11 1.66 1.74 78.0 -1.21 -0.36 13.2 87 3 4 12 2 5 2 0  TRP 1405 B
12 1.98 2.72 89.3 -1.64 -0.55 19.4 85 5 9 9 5 4 0 0  
13 1.77 1.84 90.3 -1.41 -0.44 15.9 87 6 7 11 7 6 2 0  TRP 1208 A
14 1.70 2.33 96.2 -1.55 -0.40 17.8 83 6 9 12 8 5 2 0  TRP 1405 B
15 1.78 1.83 97.4 -2.18 -0.59 25.4 84 5 13 11 1 4 2 0  CA 1207 A TRP 1405 B
16 1.93 2.20 97.2 -2.07 -0.59 27.0 84 7 12 8 2 2 0 1  
17 1.73 1.80 98.8 -1.46 -0.43 15.1 88 6 6 15 6 6 4 0  TRP 1208 A TRP 1405 B
18 1.81 1.87 124.8 -2.13 -0.59 25.1 84 6 15 13 5 4 2 0  SPM 1210 A TRP 1405 B NAG 1 H NAG 2 H
19 1.69 1.76 136.2 -1.61 -0.52 18.4 87 5 13 16 5 5 2 1  NAG 1402 B NAG 1403 B TRP 1405 B
20 1.54 3.17 156.0 -1.35 -0.34 19.2 83 8 7 9 7 5 0 0  NAG 1402 B NAG 1403 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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