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PDBsum entry 8szg
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Pore analysis for: 8szg calculated with MOLE 2.0
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PDB id
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8szg
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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22 pores,
coloured by radius |
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20 pores,
coloured by radius
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20 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.92 |
4.87 |
31.5 |
-2.85 |
-0.43 |
28.4 |
74 |
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7 |
1 |
2 |
0 |
2 |
1 |
0 |
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PCW 1204 A CLR 1401 B
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2 |
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1.46 |
1.67 |
49.3 |
1.66 |
0.74 |
1.4 |
76 |
0 |
1 |
3 |
11 |
7 |
0 |
0 |
YP4 1407 B
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3 |
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1.29 |
1.29 |
53.6 |
-2.07 |
-0.56 |
21.3 |
75 |
4 |
2 |
2 |
1 |
1 |
1 |
0 |
PCW 1204 A CLR 1401 B
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4 |
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2.90 |
2.81 |
73.6 |
1.30 |
0.78 |
6.4 |
72 |
4 |
0 |
2 |
10 |
10 |
1 |
1 |
YP4 1201 A PCW 1204 A CLR 1401 B
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5 |
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1.47 |
1.64 |
103.5 |
1.61 |
0.78 |
2.7 |
75 |
2 |
0 |
3 |
14 |
11 |
0 |
2 |
YP4 1407 B
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6 |
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1.22 |
1.34 |
141.7 |
-1.63 |
-0.37 |
21.0 |
83 |
13 |
5 |
5 |
11 |
2 |
3 |
0 |
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7 |
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1.18 |
1.38 |
219.0 |
-1.29 |
-0.32 |
16.4 |
79 |
9 |
7 |
10 |
11 |
7 |
3 |
1 |
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8 |
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1.16 |
1.38 |
234.1 |
-1.28 |
-0.19 |
19.7 |
78 |
14 |
4 |
7 |
11 |
6 |
3 |
1 |
PCW 1204 A CLR 1401 B
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9 |
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1.21 |
2.36 |
281.9 |
-0.27 |
0.09 |
12.6 |
76 |
17 |
9 |
11 |
28 |
16 |
5 |
6 |
YP4 1201 A PCW 1204 A CLR 1401 B
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10 |
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1.79 |
1.85 |
69.1 |
-1.83 |
-0.47 |
20.9 |
85 |
7 |
7 |
10 |
4 |
5 |
2 |
0 |
TRP 1208 A
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11 |
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1.66 |
1.74 |
78.0 |
-1.21 |
-0.36 |
13.2 |
87 |
3 |
4 |
12 |
2 |
5 |
2 |
0 |
TRP 1405 B
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12 |
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1.98 |
2.72 |
89.3 |
-1.64 |
-0.55 |
19.4 |
85 |
5 |
9 |
9 |
5 |
4 |
0 |
0 |
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13 |
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1.77 |
1.84 |
90.3 |
-1.41 |
-0.44 |
15.9 |
87 |
6 |
7 |
11 |
7 |
6 |
2 |
0 |
TRP 1208 A
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14 |
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1.70 |
2.33 |
96.2 |
-1.55 |
-0.40 |
17.8 |
83 |
6 |
9 |
12 |
8 |
5 |
2 |
0 |
TRP 1405 B
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15 |
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1.78 |
1.83 |
97.4 |
-2.18 |
-0.59 |
25.4 |
84 |
5 |
13 |
11 |
1 |
4 |
2 |
0 |
CA 1207 A TRP 1405 B
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16 |
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1.93 |
2.20 |
97.2 |
-2.07 |
-0.59 |
27.0 |
84 |
7 |
12 |
8 |
2 |
2 |
0 |
1 |
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17 |
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1.73 |
1.80 |
98.8 |
-1.46 |
-0.43 |
15.1 |
88 |
6 |
6 |
15 |
6 |
6 |
4 |
0 |
TRP 1208 A TRP 1405 B
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18 |
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1.81 |
1.87 |
124.8 |
-2.13 |
-0.59 |
25.1 |
84 |
6 |
15 |
13 |
5 |
4 |
2 |
0 |
SPM 1210 A TRP 1405 B NAG 1 H NAG 2 H
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19 |
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1.69 |
1.76 |
136.2 |
-1.61 |
-0.52 |
18.4 |
87 |
5 |
13 |
16 |
5 |
5 |
2 |
1 |
NAG 1402 B NAG 1403 B TRP 1405 B
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20 |
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1.54 |
3.17 |
156.0 |
-1.35 |
-0.34 |
19.2 |
83 |
8 |
7 |
9 |
7 |
5 |
0 |
0 |
NAG 1402 B NAG 1403 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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