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PDBsum entry 8sxw

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 8sxw calculated with MOLE 2.0 PDB id
8sxw
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.09 4.83 27.4 1.63 0.42 7.2 75 2 0 0 5 2 0 0  
2 2.98 3.24 32.6 -2.33 -0.44 23.3 74 3 1 2 1 2 1 0  
3 1.19 3.72 33.4 -1.88 0.05 22.8 74 6 4 1 2 3 2 0  
4 2.85 2.86 40.8 -1.63 -0.51 16.5 72 4 1 2 1 2 2 0  
5 1.19 3.70 41.2 -1.60 -0.02 21.5 77 6 5 1 3 3 2 0  
6 3.35 3.42 47.9 -0.71 -0.02 19.3 73 4 3 2 5 2 0 0  
7 2.91 4.03 54.5 -1.44 -0.42 20.7 79 5 4 3 4 1 1 0  
8 1.86 1.85 60.5 -0.94 -0.18 21.4 75 5 5 1 5 2 1 0  
9 1.47 2.35 65.1 -1.53 -0.23 20.5 84 5 4 5 5 2 2 0  
10 1.45 2.35 69.6 -1.52 -0.26 19.2 83 4 5 5 6 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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