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PDBsum entry 8swc

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Top Page protein dna_rna ligands metals tunnels links
Tunnel analysis for: 8swc calculated with MOLE 2.0 PDB id
8swc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 1 tunnel, coloured by tunnel radius 1 tunnel, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 1.32 19.7 -1.07 0.07 2.6 80 0 0 3 0 2 0 0  G 11 B U 12 B G 13 B A 14 B DA 9 C DC 10 C DC 11 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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