PDBsum entry 8std Go to PDB code:  Tunnel analysis for: 8std calculated with MOLE 2.0 PDB id 8std Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.87 2.14 16.9 0.66 0.36 11.1 73 0 1 0 4 3 0 0   2 1.57 2.81 28.6 0.35 0.28 10.4 81 1 2 1 5 3 0 0   3 1.28 2.20 16.3 1.86 0.34 1.6 96 0 0 1 6 0 0 0   4 1.22 2.40 15.4 -0.26 0.15 7.4 67 1 0 2 2 3 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.