PDBsum entry 8srs Go to PDB code:  Tunnel analysis for: 8srs calculated with MOLE 2.0 PDB id 8srs Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 1.28 108.2 -1.85 -0.37 21.2 80 11 5 6 5 3 0 0  A 12 B U 13 B A 17 B C 18 B G 19 B U 59 B DC 21 C DG 22 C DT 0 c DC 1 c DT 2 c DC 3 c DA 4 c DT 5 c 2 1.24 1.81 117.4 -0.67 -0.12 16.5 78 15 5 5 16 6 4 0  A 17 B C 18 B G 19 B U 59 B DC 21 C DC 36 D DT 37 D 3 1.24 1.28 128.7 -1.21 -0.27 19.6 76 11 2 2 6 3 0 0  A 2 B C 3 B G 4 B C 5 B U 7 B A 8 B G 11 B A 12 B U 13 B A 17 B C 18 B G 19 B U 59 B DC 21 C DG 22 C DC 16 D DT 17 D DT 0 c DC 1 c DT 2 c DC 3 c DA 4 c DT 5 c DC 6 c DT 7 c DT 8 c DT 9 c DT 11 c DC 13 c DT 15 c DC 16 c DA 17 c DG 18 c 4 1.19 1.30 128.1 -1.30 -0.30 19.0 78 10 2 3 7 4 0 0  C 3 B G 4 B C 5 B U 7 B A 8 B G 11 B A 12 B U 13 B A 17 B C 18 B G 19 B U 59 B A 65 B DC 21 C DG 22 C DT 0 c DC 1 c DT 2 c DC 3 c DA 4 c DT 5 c DC 6 c DT 7 c DT 8 c DT 9 c 5 1.17 1.80 17.6 -0.06 0.03 8.2 71 2 2 4 3 5 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.