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PDBsum entry 8srm

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 8srm calculated with MOLE 2.0 PDB id
8srm
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.41 2.89 43.6 0.64 0.10 8.2 75 3 2 4 9 3 0 1  
2 2.55 2.63 46.8 -0.60 -0.39 7.1 81 5 2 6 5 0 3 2  
3 1.36 1.62 49.4 1.28 0.25 4.7 75 1 2 2 14 3 0 3  
4 2.14 2.14 52.2 -0.33 -0.15 12.5 70 7 4 2 8 5 0 6  
5 1.32 1.58 73.9 0.16 -0.06 9.8 80 4 3 5 13 1 1 3  
6 1.48 1.47 127.4 0.23 0.01 6.3 71 4 3 7 21 7 6 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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