PDBsum entry 8srd Go to PDB code:  Pore analysis for: 8srd calculated with MOLE 2.0 PDB id 8srd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   34 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 2.34 29.0 -0.52 -0.09 16.0 80 2 8 3 6 2 0 0  MG 1705 B MG 1706 B APR 1708 B 2 1.42 1.99 139.2 -2.30 -0.58 27.8 82 21 17 12 6 2 5 0   3 1.48 1.61 143.6 -1.51 -0.31 25.2 78 17 9 5 13 6 0 0   4 1.71 2.13 146.3 -0.86 -0.10 21.6 80 12 12 7 18 6 3 0  CLR 1709 A CLR 1710 A CLR 1707 B 5 1.66 1.90 162.5 -2.13 -0.50 26.7 83 24 16 14 12 2 6 0   6 1.23 4.10 197.2 -1.72 -0.34 18.8 83 22 20 18 24 7 8 0  APR 1708 B 7 1.23 4.12 197.7 -1.69 -0.34 18.7 83 22 20 18 24 7 8 0  APR 1708 A 8 1.50 1.64 207.7 -1.97 -0.46 25.4 81 25 22 17 17 3 8 0   9 1.19 4.10 213.5 -1.70 -0.40 17.6 83 24 20 26 22 7 8 0  APR 1708 A 10 1.19 4.12 211.9 -1.69 -0.37 17.9 82 26 20 22 23 8 9 0  APR 6010 D 11 1.44 1.44 234.6 -0.74 -0.09 20.3 79 19 14 10 27 12 3 0  CLR 1709 A CLR 1710 A CLR 1707 B 12 1.45 1.46 228.3 -1.78 -0.41 25.2 80 27 17 15 14 8 5 0   13 1.19 3.90 234.3 -1.47 -0.27 17.5 81 26 26 21 32 10 10 0  APR 1708 A APR 1708 B 14 1.31 1.31 239.2 -1.74 -0.41 24.3 82 30 20 17 16 8 6 0   15 1.18 4.01 251.5 -1.53 -0.33 16.6 82 28 26 29 31 10 10 0  APR 1708 B APR 6010 D 16 1.64 2.05 255.2 -1.28 -0.26 22.4 82 26 23 19 26 8 9 0  CLR 1709 A CLR 1710 A CLR 1707 B 17 1.31 1.70 279.4 -1.79 -0.40 23.4 81 31 20 20 20 9 8 0   18 1.46 1.96 308.1 -1.29 -0.22 20.0 81 31 27 23 34 12 13 0  CLR 1709 A CLR 1710 A CLR 1707 B APR 1708 B 19 1.38 3.06 318.3 -1.31 -0.24 20.4 81 31 32 25 33 12 13 0  CLR 1709 A CLR 1710 A APR 6010 D 20 1.34 3.84 326.1 -1.58 -0.33 22.6 80 34 29 22 32 12 10 0  APR 1708 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.