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PDBsum entry 8smf

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 8smf calculated with MOLE 2.0 PDB id
8smf
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.52 2.86 28.1 -1.94 -0.50 14.8 88 4 4 4 2 2 0 0  OJC 101 F
2 1.81 1.97 82.9 -1.89 -0.45 17.8 87 7 8 7 6 2 0 0  OJC 101 C
3 1.97 4.10 28.7 -1.51 -0.30 11.5 93 2 3 6 4 2 0 0  OJC 101 H
4 1.59 1.78 29.1 -0.19 -0.09 8.5 70 1 2 2 1 6 1 0  
5 2.51 2.75 50.2 -1.51 -0.36 10.7 87 2 3 5 4 4 0 0  OJC 101 H

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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