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PDBsum entry 8sfe

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Pore analysis for: 8sfe calculated with MOLE 2.0 PDB id
8sfe
Pores calculated on whole structure Pores calculated excluding ligands

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26 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.55 1.73 48.2 -2.45 -0.49 28.2 81 6 5 4 4 1 1 0  
2 2.83 3.02 59.3 -1.12 -0.44 21.1 88 4 4 3 6 0 0 0  
3 3.80 3.86 92.1 -2.40 -0.59 32.6 81 12 10 5 4 0 1 0  
4 1.54 1.75 101.9 -2.20 -0.54 27.3 82 14 10 7 6 0 1 0  
5 2.19 2.28 119.2 -2.12 -0.57 26.9 83 10 14 9 6 1 1 0  
6 1.56 1.78 125.2 -2.05 -0.55 24.2 83 13 14 10 8 1 1 0  
7 1.46 2.10 157.5 -1.67 -0.41 24.6 83 9 10 8 8 1 0 2  
8 1.55 2.16 158.3 -1.84 -0.55 24.5 85 11 13 10 8 1 1 1  
9 1.23 1.84 185.5 -0.27 -0.13 15.7 83 8 11 9 19 1 1 0  
10 1.57 1.80 186.1 -1.52 -0.39 22.7 85 14 10 10 13 0 1 0  
11 1.22 1.79 199.8 -1.56 -0.44 20.0 83 12 15 10 10 2 3 0  ADP 601 G
12 2.15 2.36 202.0 -2.16 -0.54 28.0 82 24 16 11 10 2 2 0  
13 1.22 1.83 230.4 -1.60 -0.55 18.8 89 11 14 18 13 1 2 0  ADP 601 G
14 1.62 1.73 251.3 -0.84 -0.18 18.1 79 11 15 8 19 7 2 1  
15 1.64 1.67 277.2 -1.50 -0.31 21.9 76 19 19 9 15 8 2 0  
16 1.63 2.93 274.0 -1.91 -0.61 21.6 87 21 18 20 12 1 1 0  
17 1.44 1.60 286.9 -1.60 -0.42 23.2 82 24 26 19 18 3 2 0  
18 1.28 1.76 295.3 -0.46 -0.05 17.4 78 15 14 6 27 8 3 1  
19 1.18 1.24 282.5 -1.18 -0.35 19.5 84 23 18 22 27 3 2 0  ADP 601 D
20 1.64 1.69 292.4 -0.81 -0.18 17.1 79 17 19 13 23 9 3 0  
21 1.25 1.74 338.3 -1.49 -0.45 21.1 84 25 21 13 19 2 3 0  
22 1.91 2.46 333.6 -1.73 -0.42 26.0 82 29 29 14 19 2 1 0  
23 1.41 1.62 340.5 -1.02 -0.28 17.2 80 18 24 22 25 11 4 0  
24 1.20 2.10 370.0 -1.19 -0.30 19.1 84 23 20 17 23 4 2 1  
25 2.50 2.81 396.9 -1.45 -0.38 24.5 82 26 30 13 24 2 1 1  
26 1.15 1.79 435.2 -1.68 -0.44 24.1 83 35 28 23 25 4 5 1  
27 1.22 1.67 475.5 -0.85 -0.23 18.5 82 34 24 26 44 6 3 4  
28 1.49 1.96 483.6 -1.42 -0.33 22.3 80 33 32 23 30 9 6 1  
29 1.19 1.60 518.2 -0.51 -0.12 15.8 79 27 27 26 47 13 4 5  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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