PDBsum entry 8sdo Go to PDB code:  Tunnel analysis for: 8sdo calculated with MOLE 2.0 PDB id 8sdo Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.72 1.89 15.1 1.22 0.43 9.3 83 3 2 0 9 2 1 0  ALY 5 B 2 1.45 1.69 17.8 0.29 0.41 1.6 73 0 0 0 6 2 2 0   3 1.21 1.32 17.0 -0.77 0.21 23.2 70 3 1 0 4 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.