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PDBsum entry 8sda
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Pore analysis for: 8sda calculated with  MOLE 2.0
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PDB id
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8sda
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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18 pores,
coloured by radius
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18 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.28 |
2.47 |
26.2 |
0.15 |
0.31 |
15.4 |
78 |
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4 |
1 |
2 |
7 |
2 |
0 |
0 |
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POV 602 B POV 601 C
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2 |
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1.31 |
2.36 |
29.7 |
-0.62 |
0.02 |
20.4 |
79 |
4 |
2 |
1 |
5 |
0 |
1 |
0 |
POV 606 A
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3 |
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1.56 |
2.42 |
46.8 |
2.54 |
0.84 |
0.8 |
80 |
0 |
0 |
3 |
16 |
3 |
2 |
0 |
POV 603 C
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4 |
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1.21 |
1.42 |
48.0 |
-1.58 |
-0.36 |
14.4 |
77 |
3 |
3 |
4 |
4 |
2 |
1 |
0 |
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5 |
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1.53 |
1.69 |
48.6 |
-1.50 |
-0.36 |
13.0 |
91 |
3 |
3 |
7 |
4 |
2 |
0 |
0 |
POV 602 B POV 601 C
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6 |
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1.14 |
1.92 |
50.7 |
-1.15 |
-0.18 |
11.0 |
81 |
4 |
3 |
6 |
4 |
3 |
2 |
0 |
POV 601 A POV 603 B
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7 |
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1.30 |
2.35 |
69.0 |
1.34 |
0.60 |
13.7 |
76 |
5 |
2 |
1 |
18 |
1 |
0 |
0 |
POV 601 A POV 602 A POV 603 A
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8 |
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1.22 |
1.45 |
73.1 |
1.21 |
0.51 |
5.5 |
74 |
3 |
0 |
4 |
14 |
5 |
2 |
0 |
POV 601 D
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9 |
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1.34 |
2.97 |
82.6 |
1.44 |
0.52 |
8.9 |
77 |
4 |
1 |
3 |
14 |
5 |
0 |
0 |
POV 601 A POV 602 A POV 603 A
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10 |
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1.15 |
1.13 |
88.0 |
0.35 |
0.37 |
9.7 |
79 |
5 |
2 |
3 |
10 |
3 |
1 |
0 |
POV 601 A POV 603 A POV 601 B POV 603 B
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11 |
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1.23 |
1.25 |
96.0 |
1.81 |
0.56 |
4.6 |
74 |
3 |
0 |
2 |
27 |
5 |
2 |
0 |
POV 603 C POV 601 D
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12 |
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1.08 |
1.77 |
98.1 |
1.83 |
0.47 |
3.2 |
72 |
2 |
1 |
1 |
29 |
5 |
3 |
0 |
POV 602 A
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13 |
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1.61 |
2.57 |
96.7 |
2.08 |
0.67 |
4.3 |
74 |
3 |
1 |
2 |
21 |
6 |
2 |
0 |
POV 601 A POV 602 A POV 603 A
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14 |
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1.33 |
2.34 |
106.7 |
-1.71 |
-0.27 |
19.7 |
84 |
8 |
3 |
8 |
7 |
2 |
1 |
0 |
POV 606 A
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15 |
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1.08 |
1.14 |
110.0 |
-0.52 |
0.09 |
16.9 |
77 |
8 |
4 |
4 |
15 |
2 |
1 |
0 |
POV 601 A POV 602 A POV 601 B POV 603 B
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16 |
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1.24 |
1.27 |
129.9 |
1.74 |
0.55 |
5.9 |
71 |
6 |
1 |
1 |
27 |
7 |
2 |
0 |
POV 601 A POV 602 A POV 603 A POV 601 D
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17 |
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2.11 |
2.14 |
229.8 |
0.72 |
0.39 |
9.0 |
72 |
9 |
4 |
5 |
43 |
12 |
3 |
0 |
POV 604 A POV 605 A POV 606 A POV 602 B POV 603 B
POV 601 D POV 602 D
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18 |
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1.25 |
1.28 |
228.9 |
0.33 |
0.31 |
10.6 |
75 |
12 |
4 |
5 |
36 |
10 |
3 |
0 |
POV 604 A POV 605 A POV 606 A POV 602 B POV 603 B
POV 601 D POV 602 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program