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PDBsum entry 8scm
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Pore analysis for: 8scm calculated with  MOLE 2.0
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PDB id
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8scm
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.00 |
2.00 |
25.1 |
-1.13 |
-0.58 |
14.2 |
80 |
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2 |
2 |
1 |
0 |
1 |
0 |
0 |
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DG 3 B DC 12 C DA 13 C DG 1 E DT 9 F DC 10 F DG
11 F
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2 |
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1.44 |
1.44 |
42.4 |
-1.13 |
-0.57 |
16.8 |
82 |
3 |
2 |
1 |
2 |
1 |
0 |
0 |
DG 3 B DA 13 C DG 1 E DT 9 F
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3 |
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2.11 |
2.11 |
71.2 |
-1.77 |
-0.56 |
25.2 |
79 |
5 |
6 |
1 |
1 |
1 |
0 |
0 |
DG 1 B DC 2 B DG 3 E DA 4 E DT 5 E DC 6 E DA 7 E
DA 2 F DC 3 F DG 4 F DC 5 F DA 13 F
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4 |
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2.48 |
2.48 |
73.8 |
-1.65 |
-0.40 |
24.1 |
83 |
7 |
4 |
3 |
2 |
2 |
1 |
0 |
DC 6 E DA 7 E DA 2 F DC 3 F DG 4 F DC 5 F
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5 |
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1.07 |
2.19 |
85.3 |
-1.85 |
-0.54 |
20.3 |
79 |
5 |
4 |
4 |
2 |
3 |
1 |
0 |
DC 6 E DA 7 E DA 2 F DC 3 F DG 4 F DC 5 F
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6 |
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2.13 |
2.13 |
100.3 |
-1.14 |
-0.33 |
19.0 |
78 |
7 |
5 |
2 |
1 |
3 |
1 |
0 |
DG 1 B DC 2 B DG 3 E DA 4 E DT 5 E DA 2 F DC 3 F
DG 4 F DA 13 F
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program