PDBsum entry 8sbe

Pore analysis for: 8sbe calculated with

MOLE 2.0

PDB id

8sbe

Pores calculated on whole structure

Pores calculated excluding ligands

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6 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.86

2.08

27.6

1.08

0.67

2.7

83

0

2

1

6

2

2

0

2

1.46

1.56

32.1

-0.06

0.12

12.5

83

2

1

1

6

2

0

0

3

1.43

1.56

39.0

-0.21

0.29

14.0

81

2

2

4

6

3

2

0

4

1.17

1.63

123.3

1.98

0.73

2.8

77

0

1

0

15

3

1

3

5

1.37

2.77

145.2

1.10

0.50

5.9

81

2

2

3

14

7

3

0

6

1.34

1.35

153.6

1.33

0.65

4.9

79

2

2

4

18

8

4

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.