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PDBsum entry 8sas
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Pore analysis for: 8sas calculated with  MOLE 2.0
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PDB id
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8sas
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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21 pores,
coloured by radius |
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19 pores,
coloured by radius
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19 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
1.95 |
57.1 |
-0.35 |
-0.02 |
10.0 |
75 |
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4 |
1 |
4 |
9 |
3 |
1 |
0 |
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2 |
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1.19 |
1.20 |
76.3 |
-1.52 |
-0.58 |
16.9 |
88 |
4 |
4 |
8 |
6 |
0 |
0 |
0 |
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3 |
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1.36 |
2.09 |
77.2 |
-1.16 |
-0.37 |
4.5 |
86 |
0 |
1 |
8 |
1 |
3 |
1 |
0 |
NAG 2 V MAN 7 V MAN 9 V
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4 |
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1.43 |
1.53 |
87.8 |
-2.23 |
-0.53 |
22.4 |
86 |
11 |
3 |
3 |
4 |
1 |
3 |
0 |
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5 |
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2.27 |
2.45 |
87.9 |
-2.50 |
-0.45 |
27.6 |
82 |
15 |
4 |
4 |
2 |
1 |
2 |
0 |
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6 |
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1.42 |
1.58 |
94.1 |
-2.88 |
-0.51 |
32.5 |
86 |
16 |
4 |
5 |
3 |
0 |
1 |
0 |
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7 |
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1.21 |
1.39 |
110.2 |
-0.91 |
-0.18 |
12.2 |
85 |
2 |
4 |
9 |
11 |
2 |
1 |
0 |
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8 |
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1.35 |
2.54 |
116.3 |
-1.07 |
-0.47 |
9.2 |
89 |
2 |
4 |
14 |
9 |
2 |
1 |
0 |
NAG 1 W NAG 2 W
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9 |
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1.58 |
2.14 |
126.1 |
-1.20 |
-0.42 |
11.1 |
87 |
2 |
5 |
10 |
10 |
3 |
0 |
0 |
NAG 2 V MAN 7 V MAN 9 V NAG 1 W NAG 2 W
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10 |
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1.26 |
1.48 |
131.8 |
-1.32 |
-0.26 |
17.6 |
79 |
13 |
5 |
9 |
7 |
4 |
2 |
0 |
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11 |
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1.65 |
2.50 |
139.4 |
-1.86 |
-0.35 |
23.8 |
85 |
15 |
7 |
10 |
8 |
2 |
2 |
1 |
NAG 1 S
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12 |
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1.38 |
1.53 |
143.4 |
-1.72 |
-0.44 |
20.9 |
87 |
12 |
6 |
8 |
9 |
2 |
2 |
1 |
NAG 1 S
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13 |
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1.26 |
1.25 |
163.7 |
-0.73 |
-0.19 |
10.6 |
84 |
5 |
7 |
8 |
8 |
8 |
1 |
1 |
NAG 1 Q NAG 2 Q BMA 3 Q MAN 4 Q NAG 1 R NAG 2 R M
AN 4 R MAN 11 R NAG 1 T NAG 2 T BMA 3 T
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14 |
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1.52 |
1.73 |
205.6 |
-1.84 |
-0.43 |
21.9 |
83 |
21 |
9 |
16 |
11 |
4 |
1 |
2 |
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15 |
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1.74 |
1.99 |
202.1 |
-1.71 |
-0.43 |
19.3 |
82 |
19 |
9 |
16 |
10 |
5 |
2 |
2 |
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16 |
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1.39 |
3.00 |
235.1 |
-1.27 |
-0.32 |
18.3 |
84 |
16 |
12 |
19 |
16 |
6 |
2 |
3 |
NAG 1 S
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17 |
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1.23 |
1.51 |
240.7 |
-1.36 |
-0.40 |
17.7 |
86 |
9 |
10 |
11 |
10 |
3 |
3 |
0 |
NAG 2 S
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18 |
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1.21 |
2.57 |
285.0 |
-1.53 |
-0.39 |
16.9 |
85 |
13 |
10 |
18 |
11 |
9 |
3 |
2 |
NAG 1 Q NAG 2 Q MAN 4 Q NAG 1 R NAG 2 R BMA 3 R M
AN 4 R MAN 7 R MAN 10 R MAN 11 R NAG 1 T NAG 2 T
BMA 3 T
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19 |
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1.30 |
1.69 |
281.0 |
-1.63 |
-0.35 |
18.3 |
84 |
16 |
11 |
20 |
10 |
9 |
3 |
2 |
NAG 1 Q NAG 2 Q MAN 4 Q NAG 1 R NAG 2 R MAN 4 R M
AN 7 R MAN 11 R NAG 1 T NAG 2 T BMA 3 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program