PDBsum entry 8s9p Go to PDB code:  Tunnel analysis for: 8s9p calculated with MOLE 2.0 PDB id 8s9p Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 3.16 19.7 2.91 1.15 0.6 62 0 0 1 9 1 0 0   2 1.13 2.94 45.0 2.48 0.74 7.1 75 1 2 1 17 1 1 0   3 1.18 1.34 21.4 0.86 0.51 2.9 80 1 0 2 6 1 1 0   4 1.18 2.49 21.2 0.78 0.68 6.0 82 1 0 1 6 1 1 0   5 1.10 1.43 15.5 1.59 0.67 4.2 78 1 1 0 6 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.