PDBsum entry 8s5g Go to PDB code:  Pore analysis for: 8s5g calculated with MOLE 2.0 PDB id 8s5g Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 4.17 5.47 33.0 -1.67 -0.53 23.0 77 3 5 2 4 2 2 0   2 1.12 2.56 34.7 -1.86 -0.71 18.3 81 1 3 2 2 2 0 0   3 1.43 1.42 35.6 -1.31 -0.46 17.5 86 4 3 4 3 1 0 0   4 2.94 3.09 35.9 -1.24 -0.39 14.8 79 4 4 2 2 3 0 0   5 2.88 3.51 45.3 -2.97 -0.49 31.4 78 8 6 3 2 3 0 0   6 1.20 1.41 47.8 2.77 1.01 0.6 65 0 0 0 17 8 0 0  3PE 401 D CDL 401 E 7 1.17 1.38 50.2 2.46 0.75 1.6 68 1 0 0 15 4 0 0  3PE 401 D CDL 401 E 8 2.21 2.37 50.8 -0.91 -0.39 13.8 83 3 7 3 4 2 1 0   9 2.53 4.24 50.9 1.84 1.01 8.2 71 4 0 0 8 7 0 0  3PE 401 D CDL 401 E 10 2.27 2.39 64.2 -1.35 -0.58 18.2 83 4 9 4 6 1 3 0   11 2.18 2.73 64.3 -1.33 -0.53 11.6 84 3 5 8 6 3 0 0   12 1.45 1.45 76.8 -0.82 -0.32 14.8 85 6 6 6 7 4 0 0   13 1.23 1.39 91.3 -0.22 0.15 18.8 71 9 7 4 12 10 0 0  3PE 401 D CDL 401 E Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.