PDBsum entry 8s4f Go to PDB code:  Tunnel analysis for: 8s4f calculated with MOLE 2.0 PDB id 8s4f Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.24 33.3 -1.01 -0.10 19.8 83 7 0 2 5 2 0 0  VV8 308 A 2 1.24 1.24 41.2 -1.18 -0.30 18.7 83 6 3 4 5 2 0 0  EDO 307 A VV8 308 A 3 1.24 1.24 43.6 -0.78 -0.28 16.9 86 5 3 6 6 1 0 0  EDO 307 A VV8 308 A 4 1.24 1.24 47.9 -0.31 0.17 9.1 77 3 2 3 8 5 2 0  PPI 302 A VV8 308 A VV8 304 B 5 1.24 1.24 49.0 -0.84 0.05 17.9 78 9 1 3 9 5 2 0  PPI 302 A VV8 308 A VV8 304 B 6 1.24 1.24 51.6 -1.40 -0.16 22.6 85 8 2 4 6 2 0 0  VV8 308 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.