PDBsum entry 8s41 Go to PDB code:  Pore analysis for: 8s41 calculated with MOLE 2.0 PDB id 8s41 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   18 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 1.77 43.7 0.23 0.05 12.5 81 4 1 3 9 3 0 0   2 1.62 2.51 45.8 0.43 0.20 10.4 78 3 3 4 10 6 0 0   3 1.21 1.48 46.2 -0.19 -0.01 18.1 82 4 4 4 9 2 0 0   4 1.28 2.16 62.4 0.22 0.28 16.7 76 4 4 2 16 1 1 1   5 1.43 2.04 93.1 -0.63 -0.11 19.1 81 9 7 8 14 7 0 0   6 1.81 2.12 130.0 -2.10 -0.36 27.9 83 11 6 9 6 1 4 0   7 1.46 2.95 136.1 -0.09 0.02 16.2 78 9 11 6 21 3 1 1   8 1.23 2.31 141.4 -0.70 -0.10 21.9 81 13 12 5 18 2 0 0   9 1.11 1.27 173.8 -2.17 -0.37 31.4 81 16 10 6 7 1 3 0   10 1.11 1.27 176.6 -2.44 -0.50 32.4 80 16 10 7 5 2 3 0   11 1.40 1.82 192.3 -0.71 -0.07 17.5 79 13 8 13 20 6 4 1   12 1.11 1.27 187.3 -1.01 -0.28 22.3 85 13 13 8 18 1 0 0   13 1.11 1.27 189.0 -0.54 -0.16 19.0 81 11 11 9 21 2 1 1   14 1.28 2.06 193.4 -1.13 -0.20 20.7 82 16 9 12 17 5 3 0   15 1.28 1.82 203.7 -0.73 -0.27 18.0 83 12 11 10 16 7 0 0   16 1.37 3.07 236.2 -1.01 -0.16 20.0 77 17 10 11 21 7 4 1   17 1.27 2.16 241.5 -1.23 -0.20 22.7 80 21 11 10 18 6 3 0   18 1.27 2.09 238.7 -1.07 -0.13 22.2 80 21 11 9 20 5 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.