PDBsum entry 8s0f Go to PDB code:  Pore analysis for: 8s0f calculated with MOLE 2.0 PDB id 8s0f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 4.69 5.63 40.6 -1.72 -0.47 14.1 81 3 5 5 1 2 0 0  DC 17 X DA 18 X 2 2.05 2.97 88.9 -1.19 -0.28 16.3 81 7 6 8 3 5 1 0  DC 17 X DA 18 X 3 1.30 1.60 106.7 1.08 0.51 4.8 71 5 2 6 19 8 1 0   4 1.46 2.43 121.2 -0.11 0.07 13.7 80 6 6 7 17 3 3 0   5 1.79 1.84 130.8 -2.43 -0.70 25.9 83 12 18 12 1 1 2 0  AGS 902 6 MG 903 6 DA 18 X DA 28 Y 6 1.43 1.64 131.6 -1.25 -0.37 15.3 83 6 9 13 9 5 2 1   7 1.22 1.36 131.6 -1.22 -0.29 15.0 82 6 7 6 9 2 2 0  DC 17 X DA 18 X DG 28 X DC 29 X DG 30 X DC 31 X D A 32 X DA 7 Y DT 8 Y DA 17 Y DT 18 Y DG 19 Y 8 1.39 1.67 148.4 -1.14 -0.33 16.6 79 10 14 13 10 5 2 0  DC 17 X DA 18 X DT 27 X DG 28 X DA 17 Y DT 18 Y DG 19 Y 9 1.20 1.70 147.9 -0.77 -0.18 11.6 79 7 7 13 12 5 2 0  DT 27 X DG 28 X DC 29 X DG 30 X DC 31 X DA 32 X D A 7 Y DT 8 Y DG 9 Y DC 10 Y 10 1.98 2.56 149.0 -1.13 -0.23 19.0 77 13 11 11 8 4 3 2   11 1.43 1.64 154.3 -0.74 -0.19 13.8 80 7 11 8 14 4 1 0  DC 17 X DA 18 X DG 28 X DC 29 X DG 30 X DC 31 X D A 32 X DT 33 X DA 7 Y DT 8 Y DA 17 Y DT 18 Y DG 19 Y 12 1.98 2.56 155.1 -1.29 -0.30 16.2 78 13 8 11 9 5 3 2   13 1.73 2.44 170.4 -1.59 -0.54 17.3 86 14 11 14 9 1 4 1  MG 1001 2 AGS 901 6 DG 16 X DC 17 X DA 18 X DC 27 Y DA 28 Y DT 29 Y 14 1.29 1.56 177.0 -1.21 -0.31 15.6 82 8 9 10 11 4 4 1  DT 27 X DG 28 X DC 29 X DG 30 X DC 31 X DA 32 X D A 7 Y DT 8 Y DG 9 Y DC 10 Y 15 1.18 1.19 179.6 -0.52 -0.14 12.4 79 8 11 15 17 7 1 0  DT 27 X DG 28 X DC 29 X DG 30 X DC 31 X DA 32 X DT 33 X DA 7 Y DT 8 Y DG 9 Y DC 10 Y 16 1.31 1.74 186.8 -1.06 -0.27 15.1 81 12 10 19 14 6 3 0   17 1.31 1.49 205.9 -1.13 -0.36 16.7 87 16 8 14 13 2 0 0  DT 4 X DG 5 X DC 6 X DA 7 X DC 14 X DT 15 X DG 16 X DC 17 X DA 18 X DC 27 Y DA 28 Y DT 29 Y DG 30 Y DC 31 Y DT 33 Y 18 1.19 2.02 204.1 -1.27 -0.34 15.0 82 10 8 13 13 3 5 0  DT 27 X DG 28 X DC 29 X DG 30 X DC 31 X DA 32 X D A 7 Y DT 8 Y DG 9 Y DC 10 Y 19 1.47 1.47 199.6 -0.89 -0.25 14.7 81 9 13 12 16 6 3 1  DT 27 X DG 28 X DC 29 X DG 30 X DC 31 X DA 32 X DT 33 X DA 7 Y DT 8 Y DG 9 Y DC 10 Y 20 1.23 1.68 214.1 -0.79 -0.24 14.8 86 13 11 20 19 5 3 2   21 1.13 1.60 224.2 -1.08 -0.51 13.3 87 11 7 11 9 2 1 1  DT 4 X DG 5 X DC 6 X DA 7 X DC 14 X DT 15 X DG 16 X DC 17 X DA 18 X DC 27 Y DA 28 Y DT 29 Y DG 30 Y DC 31 Y DT 33 Y 22 1.24 1.40 218.5 -0.51 -0.13 16.2 83 17 3 8 17 3 1 1   23 1.41 1.62 221.2 -0.51 -0.18 11.3 84 12 11 20 21 7 3 0  DC 29 X DG 30 X DC 31 X DA 32 X DT 33 X DA 7 Y DT 8 Y 24 1.26 1.71 224.2 -1.10 -0.29 18.2 84 13 14 12 17 3 2 0  DC 17 X DA 18 X DG 28 X DC 29 X DG 30 X DC 31 X D A 17 Y DT 18 Y DG 19 Y 25 1.24 1.67 245.9 -0.85 -0.24 15.6 82 13 14 19 19 6 2 0  DT 27 X DG 28 X DC 29 X DG 30 X DC 31 X DT 8 Y DG 9 Y DC 10 Y 26 1.97 2.47 253.0 -1.27 -0.24 20.7 79 21 17 17 11 7 3 2   27 1.99 2.46 259.2 -1.39 -0.30 18.9 79 21 13 17 12 8 3 2   28 1.37 1.50 270.4 -1.11 -0.31 17.7 84 15 16 16 19 5 4 1  DT 27 X DG 28 X DC 29 X DG 30 X DC 31 X DT 8 Y DG 9 Y DC 10 Y 29 1.24 1.28 279.9 -1.20 -0.50 12.8 88 14 8 17 14 5 2 1  DT 4 X DG 5 X DC 6 X DA 7 X DT 8 X DG 9 X DT 33 Y 30 1.34 2.58 315.4 -0.56 -0.21 15.1 78 12 9 5 16 3 6 3   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.