PDBsum entry 8ruc Go to PDB code:  Tunnel analysis for: 8ruc calculated with MOLE 2.0 PDB id 8ruc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 2.04 58.0 -1.00 -0.31 17.8 76 7 4 2 6 1 2 0   2 1.33 2.44 15.6 1.69 0.81 1.7 74 1 0 0 6 3 0 0   3 1.29 2.49 16.8 1.59 0.74 1.6 72 1 0 0 5 3 0 0   4 1.37 2.63 16.1 2.16 0.72 3.1 77 1 0 0 5 2 0 0   5 1.51 2.61 16.8 -0.80 -0.01 25.4 84 5 2 0 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.