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PDBsum entry 8rql

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 8rql calculated with MOLE 2.0 PDB id
8rql
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.26 29.6 0.01 0.04 5.8 79 1 0 2 6 4 1 0  FLF 402 R
2 1.52 1.85 38.2 -0.09 -0.01 7.5 78 3 1 2 6 6 1 0  FLF 402 R
3 1.50 1.62 38.4 0.61 0.29 6.6 74 3 0 1 8 7 1 0  FLF 402 R
4 1.41 1.59 38.6 1.02 0.63 1.6 84 0 1 5 7 7 1 0  FLF 401 R
5 1.51 1.63 44.4 0.28 0.16 8.5 79 3 2 2 9 6 1 0  FLF 402 R
6 1.42 1.59 61.9 0.90 0.37 2.1 81 1 1 5 8 6 0 0  FLF 401 R

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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