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PDBsum entry 8qy1

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 8qy1 calculated with MOLE 2.0 PDB id
8qy1
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.64 5.65 28.2 -2.06 -0.03 12.1 67 1 2 5 1 8 0 0  ACT 204 B
2 2.75 2.75 30.1 -1.75 -0.35 16.5 73 2 3 0 0 4 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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