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PDBsum entry 8qw0

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8qw0 calculated with MOLE 2.0 PDB id
8qw0
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 1.35 49.1 -1.77 -0.39 28.0 82 12 4 2 8 0 0 0  
2 1.19 1.35 51.0 -1.77 -0.43 27.0 84 12 4 3 8 0 0 0  
3 1.23 1.44 52.7 -1.81 -0.41 27.6 84 12 4 3 8 0 0 0  
4 1.47 1.47 123.0 -1.35 -0.39 19.7 81 9 9 1 9 2 3 0  
5 1.41 1.79 125.5 -1.08 -0.11 19.6 79 10 7 5 8 5 1 0  GDP 201 E GDP 201 F
6 1.46 1.46 129.0 -1.80 -0.49 21.5 83 9 8 3 4 1 3 0  
7 1.52 1.77 169.6 -1.30 -0.24 21.6 80 12 10 2 11 4 3 0  GDP 201 E
8 1.88 1.88 175.6 -1.71 -0.31 24.2 82 12 9 4 6 3 3 0  GDP 201 E
9 1.33 1.32 243.4 -0.91 -0.27 16.2 78 12 7 3 9 5 3 1  GDP 201 E
10 1.49 1.49 72.5 -1.02 -0.38 16.1 83 6 3 1 6 1 2 0  GDP 201 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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