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PDBsum entry 8qn4

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 8qn4 calculated with MOLE 2.0 PDB id
8qn4
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.26 30.3 -1.59 -0.40 12.6 82 1 4 5 2 2 1 0  
2 1.50 1.60 68.1 -1.51 -0.31 18.0 77 4 5 5 2 2 1 0  
3 1.33 2.44 70.2 -1.26 0.00 14.6 73 3 4 4 3 4 3 0  
4 1.19 1.38 75.0 -1.62 -0.28 16.0 75 4 2 3 2 4 1 0  
5 2.23 2.45 87.8 -1.84 -0.72 13.7 90 4 6 12 5 3 2 1  
6 1.31 2.49 102.8 -1.62 -0.13 19.1 72 5 5 4 2 4 3 0  
7 1.29 1.44 103.0 -2.34 -0.56 23.5 78 10 6 5 1 3 0 0  
8 1.35 2.63 119.2 -1.91 -0.29 20.2 76 7 6 7 3 4 2 0  
9 1.18 1.37 124.2 -1.31 -0.36 11.7 80 9 3 7 8 5 6 0  
10 1.28 1.46 146.6 -1.32 -0.49 9.5 83 5 4 12 10 7 4 1  
11 1.24 1.43 152.3 -1.81 -0.51 17.1 81 15 7 9 7 4 5 0  
12 1.53 3.34 168.4 -1.56 -0.35 15.3 80 12 7 11 9 5 7 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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