PDBsum entry 8pkm Go to PDB code:  Pore analysis for: 8pkm calculated with MOLE 2.0 PDB id 8pkm Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.80 1.83 28.4 -1.64 -0.72 22.2 86 3 4 2 2 0 0 0   2 1.80 1.83 29.8 -1.73 -0.80 20.4 86 5 4 2 2 0 0 0   3 1.79 2.45 83.6 -2.26 -0.64 28.2 85 8 6 3 3 1 0 0   4 1.81 1.86 86.7 -1.71 -0.55 21.3 87 10 6 7 5 1 0 2   5 2.08 2.20 95.0 -1.48 -0.55 19.3 87 7 7 7 7 1 1 2   6 1.75 2.29 95.8 -1.63 -0.53 22.4 83 6 7 4 5 2 0 0   7 1.94 2.27 144.0 -1.75 -0.49 22.7 83 13 8 6 8 3 1 2   8 1.40 1.44 31.4 0.65 0.41 4.2 81 1 1 1 8 3 0 0  ZKV 503 R 9 1.58 2.76 34.0 0.48 0.20 8.7 90 1 2 3 7 2 1 0  ZKV 503 R Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.