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PDBsum entry 8ovc
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Pore analysis for: 8ovc calculated with  MOLE 2.0
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PDB id
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8ovc
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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13 pores,
coloured by radius |
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18 pores,
coloured by radius
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18 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.21 |
2.83 |
38.8 |
-1.71 |
-0.52 |
27.9 |
85 |
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3 |
3 |
1 |
3 |
1 |
1 |
0 |
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7PH 401 J
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2 |
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2.50 |
4.47 |
40.9 |
2.64 |
1.14 |
1.2 |
72 |
1 |
0 |
0 |
18 |
7 |
1 |
0 |
MQ9 303 C WUO 304 C CDL 605 H CDL 606 H CDL 301 I
CDL 607 L 9YF 201 b
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3 |
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1.92 |
1.98 |
44.1 |
-1.46 |
-0.22 |
22.5 |
67 |
5 |
3 |
0 |
4 |
3 |
1 |
0 |
CDL 302 I
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4 |
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1.33 |
1.64 |
54.2 |
0.70 |
0.22 |
5.1 |
79 |
2 |
0 |
3 |
14 |
5 |
1 |
0 |
MQ9 601 N CDL 603 N CDL 604 N WUO 304 O CDL 301 P
CDL 605 R 9XX 608 R 9YF 402 W
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5 |
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2.06 |
3.57 |
67.9 |
1.93 |
0.77 |
2.1 |
74 |
1 |
0 |
2 |
14 |
7 |
1 |
0 |
CDL 301 P CDL 605 R PLM 301 Y 9XX 302 Y
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6 |
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1.98 |
2.17 |
86.7 |
-1.41 |
-0.45 |
22.1 |
78 |
7 |
6 |
2 |
5 |
3 |
2 |
0 |
9YF 502 G
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7 |
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1.18 |
1.34 |
107.9 |
-1.38 |
-0.24 |
19.6 |
72 |
14 |
5 |
3 |
8 |
8 |
6 |
0 |
CDL 605 H CDL 606 H MQ9 608 H HEM 610 H
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8 |
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1.66 |
1.65 |
110.3 |
0.83 |
0.34 |
8.8 |
77 |
5 |
2 |
2 |
22 |
8 |
0 |
0 |
WUO 304 C CDL 504 G CDL 604 H MQ9 607 H MQ9 608 H
HEM 610 H CDL 611 H MQ9 605 N
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9 |
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2.16 |
3.06 |
119.6 |
2.32 |
0.81 |
3.6 |
74 |
4 |
0 |
1 |
34 |
12 |
1 |
0 |
MQ9 303 C CDL 605 H CDL 606 H CDL 301 I WUO 303 I
HEA 602 L HEA 603 L CDL 607 L 9YF 201 b 9XX 202 b
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10 |
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1.37 |
1.60 |
119.8 |
-1.57 |
-0.30 |
22.3 |
80 |
9 |
12 |
4 |
7 |
7 |
1 |
0 |
9YF 502 G
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11 |
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1.35 |
1.35 |
121.0 |
-0.38 |
-0.20 |
19.5 |
81 |
6 |
10 |
1 |
18 |
2 |
1 |
0 |
MQ9 608 H 9YF 502 M MQ9 605 N
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12 |
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1.30 |
1.32 |
122.5 |
1.51 |
0.63 |
3.3 |
78 |
2 |
0 |
3 |
37 |
9 |
1 |
0 |
MQ9 608 H 9YF 502 M MQ9 601 N CDL 603 N CDL 604 N
MQ9 605 N MQ9 606 N MQ9 303 O WUO 304 O 9XX 608 R
CDL 201 T 9YF 402 W
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13 |
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2.62 |
4.03 |
128.7 |
2.44 |
0.85 |
1.3 |
71 |
2 |
0 |
1 |
30 |
10 |
1 |
0 |
9YF 502 G MQ9 608 H MQ9 609 H 9XX 612 H CDL 301 I
CDL 607 L PLM 301 c
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14 |
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1.63 |
1.69 |
171.3 |
-1.47 |
-0.41 |
19.7 |
78 |
8 |
13 |
4 |
5 |
8 |
6 |
0 |
WUO 304 C 7PH 401 J
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15 |
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1.99 |
2.08 |
180.6 |
-0.36 |
0.04 |
14.8 |
72 |
7 |
9 |
2 |
19 |
10 |
3 |
0 |
9YF 502 G MQ9 601 N CDL 603 N CDL 604 N WUO 304 O
CDL 605 R 9XX 608 R 9YF 402 W
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16 |
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1.98 |
1.96 |
184.9 |
-0.12 |
-0.01 |
11.6 |
73 |
3 |
9 |
3 |
18 |
10 |
3 |
0 |
MQ9 601 N CDL 603 N CDL 604 N WUO 304 O CDL 605 R
9XX 608 R 9YF 402 W
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17 |
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1.65 |
2.23 |
237.9 |
-0.69 |
-0.08 |
15.4 |
76 |
9 |
14 |
5 |
21 |
14 |
3 |
0 |
MQ9 601 N CDL 603 N CDL 604 N WUO 304 O CDL 605 R
9XX 608 R 9YF 402 W
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18 |
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1.18 |
1.34 |
299.8 |
0.95 |
0.43 |
6.7 |
72 |
11 |
5 |
4 |
57 |
26 |
8 |
0 |
9YF 502 G MQ9 602 H CDL 605 H CDL 606 H MQ9 608 H
MQ9 609 H CDL 611 H 9XX 612 H CDL 301 I MQ9 601 N
HEM 602 N CDL 603 N CDL 604 N MQ9 303 O WUO 304 O
9XX 608 R CDL 201 T 9YF 402 W PLM 301 c
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program