PDBsum entry 8k5h Go to PDB code:  Pore analysis for: 8k5h calculated with MOLE 2.0 PDB id 8k5h Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   33 pores, coloured by radius 31 pores, coloured by radius 31 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.88 1.88 41.4 -1.24 -0.58 10.6 84 2 2 7 2 1 0 1   2 1.87 1.87 87.0 -1.35 -0.53 14.5 85 8 4 13 2 3 1 2   3 2.59 2.87 99.2 -1.05 -0.40 11.1 84 6 2 13 3 3 3 1  NAG 1301 B 4 1.76 2.72 102.8 -1.00 -0.37 16.2 77 5 5 5 5 4 3 1   5 1.76 2.74 124.1 -1.42 -0.29 21.2 77 10 8 7 4 6 5 0   6 1.54 3.05 127.3 -0.46 -0.03 8.2 85 4 3 13 11 5 3 0  NAG 1305 A 7 1.54 3.11 131.0 -0.60 0.00 17.0 75 7 8 6 10 10 3 0   8 1.76 2.81 138.5 -1.14 -0.42 18.1 79 6 10 10 10 2 6 1   9 1.23 1.52 145.1 -1.03 -0.35 12.8 82 8 3 10 11 3 6 1  NAG 1308 B 10 1.29 3.15 149.6 -0.53 -0.04 15.0 81 10 8 12 16 6 3 0   11 1.26 1.29 150.3 -0.59 -0.17 12.4 86 9 3 12 15 3 3 1  NAG 1306 C 12 1.85 2.74 151.0 -1.53 -0.41 22.3 79 9 12 12 8 4 7 0   13 1.28 1.53 154.3 0.13 0.17 11.8 81 10 7 11 20 7 4 0   14 1.24 3.22 158.5 -0.08 -0.17 5.0 85 4 0 12 17 2 4 2  NAG 1301 B NAG 1306 C 15 1.27 1.53 162.7 -0.18 -0.08 11.9 85 9 10 16 27 2 2 1   16 1.25 1.80 161.5 -1.37 -0.40 17.4 83 17 7 13 10 7 1 0   17 1.26 1.56 164.8 0.15 0.02 11.9 84 8 9 10 32 4 5 0   18 1.16 1.53 169.3 -1.23 -0.51 11.3 86 6 2 15 8 3 6 2  NAG 1301 B 19 1.24 1.80 172.8 -1.13 -0.42 12.8 83 12 5 14 11 5 2 1  NAG 1301 B 20 1.55 3.27 178.2 -0.84 -0.11 18.3 79 10 14 13 13 7 6 0   21 1.21 1.62 183.0 0.14 0.08 10.9 83 7 6 11 25 7 5 1  NAG 1308 A 22 1.28 3.35 181.7 -0.61 -0.13 16.1 81 11 13 17 23 4 7 0   23 1.25 1.25 200.6 -1.19 -0.41 14.8 82 13 7 11 15 7 4 1   24 1.22 1.68 206.4 -0.83 -0.20 16.6 80 15 13 13 16 9 2 0   25 1.20 1.70 217.0 -0.58 -0.22 12.4 85 9 5 16 18 8 5 1  NAG 1308 A 26 1.30 1.37 209.5 -1.38 -0.44 17.6 82 12 8 11 9 6 8 1   27 1.30 1.58 216.6 -0.88 -0.18 17.0 81 14 10 16 16 8 9 0   28 1.27 3.07 235.1 -0.89 -0.29 15.9 83 12 11 12 20 9 3 1  NAG 1308 A 29 1.33 2.17 238.0 -0.93 -0.33 15.5 85 12 11 16 28 6 7 1   30 1.24 1.57 245.4 -0.80 -0.24 15.2 83 11 8 15 21 8 10 1  NAG 1308 A 31 1.47 1.59 62.2 -1.12 -0.41 9.9 84 1 2 7 2 3 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.