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PDBsum entry 8k1v

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 8k1v calculated with MOLE 2.0 PDB id
8k1v
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.49 32.6 1.97 0.53 1.2 83 0 0 0 11 2 0 0  Y01 301 B
2 1.31 1.50 33.0 2.36 0.74 0.9 80 0 0 0 12 2 0 0  Y01 303 A
3 1.17 1.44 39.0 1.61 0.50 1.1 82 0 0 1 9 5 0 0  
4 1.31 1.50 53.1 1.79 0.48 1.1 82 0 0 0 15 4 0 0  Y01 301 B
5 1.18 3.35 54.5 2.27 1.11 0.8 69 0 0 1 9 9 0 0  Y01 301 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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